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Name Category Image requires Type interaction level License/Openness has function has topic
Cancer Imaging Phenomics Toolkit (CaPTk) Software CaPTk Collection Automated, Semi-automated Free and open source Image registration, Image analysis, Image segmentation, Object feature extraction, Image enhancement, Image visualisation Bioimage informatics
CAREless Software need a thumbnail ImageJ, Python Collection Automated, Manual, Semi-automated Free and open source Image deconvolution, Image denoising, Image enhancement Microscopy, Machine learning
Category links points to "all-contents" Forum topic
CATMAID Software CATMAID Collection Manual Free and open source Image segmentation, Interactive segmentation, Image annotation, Data handling, Visualisation, Image visualisation Data sharing, Electron microscopy, Light-sheet microscopy
CBIRetrieval Software need a thumbnail Component Semi-automated I do not know
Cell Counter ImageJ Software ImageJ Component Manual Free and open source Object counting
Cell Image Library Dataset CIL
Cell or particle Counting and scoring stained objects using CellProfiler Software jupyter Cell or particle counting and scoring the percentage of stained objects, idr-py Workflow Automated Free and open source Object classification, Analysis Bioimage informatics, Fluorescence microscopy
Cell or particle counting and scoring the percentage of stained objects Software Positivepercentcell CellProfiler Workflow Automated Free and open source Cell segmentation, Object classification, Object counting Fluorescence microscopy
Cell segmentation and measurements Software need a thumbnail CellProfiler, Segmentation of Clustered Cells in MATLAB Workflow Automated I do not know
Cell segmentation and quantification with CellX Software Matlab Image Processing Toolbox, MATLAB Workflow Automated Free and open source Image segmentation, Cell tracking Bright field microscopy, Phase contrast microscopy
Cell segmentation by EBImage, R Software need a thumbnail Graylevel Watershed for ImageJ, Segmentation of Clustered Cells in MATLAB Workflow Automated I do not know
Cell segmentation in phase contrast images Software initialisation MATLAB Component Semi-automated Free and open source Cell segmentation, Active contours, Object tracking, Cell tracking Phase contrast microscopy
Cell Tracking Challenge Dataset Dataset exemple of 3D cell tracking data set
Cell-ACDC Software Schematic overview of pipeline and GUI Python Collection Automated, Semi-automated Free and open source Cell segmentation, Model-based segmentation Bioimage informatics
Cell-IDR Dataset Cell-IDR
CellCognition Software Cell Cognition logo Segmentation of Clustered Cells in MATLAB, ICY Annotation Collection Automated Free and open source
cellpose Software Python Component Free and open source Cell segmentation Machine learning
CellProfiler Software Collection Automated, Semi-automated Free and open source
CellProfiler Align Software CellProfiler Component Automated Free and open source Rigid registration