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Name Category Image requires Type interaction level License/Openness has function has topic
Bleach Correction Software ImageJ Component Automated Free and open source Image correction Fluorescence microscopy
bleb dynamics Software need a thumbnail Gaussian blur in ImageJ, Otsu Thresholding, radial reslice, kymograph generation Workflow Semi-automated Free and open source Shape features, Cell tracking Fluorescence microscopy, Confocal fluorescence microscopy
Blend two images (Fiji scripting example) Software need a thumbnail Fiji Component Automated Free and open source, I do not know
Blender Software Collection Free and open source Image visualisation, Surface rendering, Volume rendering Bioimage informatics
Blob segmentation Software need a thumbnail Fiji, MorphoLibJ Component Automated Free and open source Image segmentation
Blood vessel segmentation and network analysis Software Fiji Workflow Automated Free and open source Image segmentation Light-sheet microscopy
BM3D denoising Software Component
BoneJ Software need a thumbnail ImageJ Collection Automated, Semi-automated Free and open source Skeletonisation
Bounding Box 3D Software Icy, CellProfiler Crop Component Automated Free and open source
BraiAn Software need a thumbnail QuPath, Python Collection, Workflow Manual Free and open source Cell segmentation, Plotting Light microscopy
brainreg Software Python Component Free and open source Alignment construction, Image registration, Affine registration, Rigid registration, Deformable registration, Feature-based registration, Annotation, Landmark assignment Bioimage informatics
Breast Cancer Histopathological Database (BreakHis) Dataset
BSIF (Binarized Statistical Image Features) Software need a thumbnail Matlab Image Processing Toolbox, MATLAB Component Automated Free and open source Image feature detection, Texture extraction, Image processing
BTrackMate Software Component, Workflow Free and open source
Building a Bioimage Analysis Workflow Using Deep Learning Training Material
Building a workflow with CellProfiler Training Material
BUnwarpJ Software ImageJ Component Semi-automated Free and open source Deformable registration, Warping Bioimage informatics
CalculateImageOverlap Software CellProfiler Component Automated Free and open source
CalculateMath Software CellProfiler Component Automated I do not know
CalculateStatistics Software CellProfiler Component Automated I do not know