Model-based segmentation

ToDo: add a few more but not too many specialised concepts under here.

StarDist - ImageJ

Component
Description

This is the ImageJ/Fiji plugin for StarDist, a cell/nuclei detection method for microscopy images with star-convex shape priors ( typically for Dapi like staining of nuclei). The plugin can be used to apply already trained models to new images.

has topic
Light microscopy
Light-sheet microscopy
Fluorescence microscopy
Multi-photon microscopy
Machine learning
has function
Image segmentation
Cell segmentation
Model-based segmentation
Stardist

Statistical Region Merging

Component
has topic
Bioimage informatics
has function
Model-based segmentation
Image generation
need a thumbnail
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