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Name Category Image requires Type interaction level License/Openness has function has topic
Tracking Performance Measures Software need a thumbnail Spot detection utilities, Track Manager Component Semi-automated Free and open source Analysis, Object tracking Bioimage informatics, Data sharing, Statistics
Tracking2.0 Software need a thumbnail ImageJ, Jama Component Automated, Semi-automated Free and open source Object tracking, Particle tracking Bioimage informatics
TrackMate Software Fiji Collection Semi-automated Free and open source Spot detection, Particle tracking Fluorescence microscopy
TrackObjects Software need a thumbnail CellProfiler Component Automated I do not know Object tracking Bioimage informatics
Trainable Weka Segmentation Software Fiji Component Semi-automated Free and open source Image segmentation, Pixel classification, Image annotation Machine learning
TrakEM2 Software Menu of TrakEM2 ImageJ, 3D Viewer Component Automated, Manual, Semi-automated Free and open source Alignment construction, Image registration, Affine registration, Rigid registration, Deformable registration, Object feature extraction, Image annotation, Image stitching, Affine transformation, Geometric distortion correction, Image visualisation Electron microscopy
Trakem2 lens distortion correction Software Fiji, TrakEM2 Component Semi-automated Free and open source Geometrical transformation, Warping, Geometric distortion correction Confocal microscopy
Transform Virtual Stack Slices Software need a thumbnail ImageJ Component Automated Free and open source Rigid registration, Geometrical transformation Bioimage informatics
TransformJ Software ImageJ Collection Automated Free and open source Geometrical transformation, Affine transformation Bioimage informatics
TReMAP Software Example_TReMAP_Result Vaa3D Component Automated, Semi-automated Free and open source Filament tracing, Image thresholding, Neuron image analysis Confocal microscopy
TTK the Topology Toolkit Software ttk Paraview Collection Automated, Manual, Semi-automated Free and open source Analysis, Clustering, Visualisation Statistics
Tube un-winder Software Fiji Component Automated Free and open source, I do not know Image projection
Tubeness Software ImageJ Component Automated Free and open source Image feature detection Bioimage informatics
Tumor Blood Vessels: 3D Tubular Network Analysis Training Material
TurboReg Software ImageJ Component Automated, Manual, Semi-automated I do not know Image registration Imaging
TurtleSeg: 3D Image Segmentation Software Software need a thumbnail Collection Manual, Semi-automated Commercial Interactive segmentation Bioimage informatics
two-photon images of dendritic spines Dataset MIP example
u-track Software Matlab Image Processing Toolbox, Bio-Formats Collection Automated, Semi-automated Free and open source Affine registration, Cell tracking, Particle tracking, Visualisation Microscopy, Fluorescence lifetime imaging microscopy
Understanding the fundamental mechanisms of biofilms development and dispersal: BIAM (Biofilm Intensity and Architecture Measurement), a new tool for studying biofilms as a function of their architecture and fluorescence intensity Training Material
Uneven illumination correction Software need a thumbnail CellProfiler, ImageJ Workflow Automated I do not know Illumination correction