ContourLines

Description

ImageJ/FIJI plugin generating contour lines with equal spacing on top of an image (using overlay).

3D Fill holes (mcib3d)

Description

Runs fill holes operation on 3D images.

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Maximum (3D) VIB Protocol

Description

This component convolves the image with maximum filter. Each voxel is set to the maximum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.

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ROI Measure

Description

ROI measurement plug-in for Icy.

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Minimum (3D) Filter VIB Protocol

Description

This component convolves the image with minimum filter. Each voxel is set to the minimum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.

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ImageJ Built-in Macro Functions

Description

A set of ImageJ Built-in Macro Functions used to perform operations on the ImageJ platform.

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Thresholder (ImageJ)

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Filament Tracing (ImageJ)

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NanoJ

Description

Set of Tools for super resolution microscopy

HAWK

Description

Preprocessing step for high-density analysis methods in super resolution localisation microscopy: it aims at correcting artefacts due to these approaches with based on Haar Wavelet Kernel Analysis.