Fractal

Type
Author
Gustavo de Medeiros
Joel Lüthi
Marco Franzon
Tommaso Comparin
Jacopo Nespolo
Prisca Liberali
Execution Platform
Implementation Type
Supported image dimension
Interaction Level
License/Openness
License
BSD 3-Clause
Description

Fractal is a framework to process high-content imaging data at scale and prepare it for interactive visualization. Fractal provides distributed workflows that convert TBs of image data into OME-Zarr files. The platform then processes the 3D image data by applying tasks like illumination correction, maximum intensity projection, 3D segmentation using cellpose and measurements using napari workflows. The pyramidal OME-Zarr files enable interactive visualization in the napari viewer.

Additional keywords
Entry Curator
Last modified
04/29/2023 - 14:45