Register Virtual Stack Slices (Fiji)

Type
Author
Albert Cardona
Ignacio Arganda-Carreras
Stephan Saalfeld
Requires
Execution Platform
Implementation Type
Programming Language
Supported image dimension
Interaction Level
License/Openness
License
GPLv3
Description

This plugin takes a sequence of image slices stored in a folder, and delivers a list of registered image slices (with enlarged canvas). One of the images in the sequence can be selected by the user as reference and it will remain intact.

The plugin can perform 6 types of image registration techniques:

  • Translation
  • Rigid (translation + rotation)
  • Similarity (translation + rotation + isotropic scaling)
  • Affine
  • Elastic (via bUnwarpJ with cubic B-splines)
  • Moving least squares

All models are aided by automatically extracted SIFT features.

Source code

Installation

This plugin is bundled with the Fijij package.

has function
Additional keywords
Entry Curator
migration