plusTipTracker

Type
Workflow
Author
Kathryn T. Applegate
Sebastien Besson
Alexandre Matova
Maria H. Bagonis
Khuloud Jaqaman
Gaudenz Danuser
Requires
Matlab Image Processing Toolbox
MATLAB
MATLAB Optimization toolbox
MATLAB Statistics toolbox
MATLAB Curve Fitting Toolbox
Execution Platform
Linux
Programming Language
Matlab
Supported image dimension
2D
time-series
Interaction Level
Automated
License/Openness
Free and open source
License
GPLv3
Description

The workflow contains a Matlab package (plusTipTracker) for segmentation and tracking of microtubule tips, based on fluorescence time-lapse movies from microtubule tip markers such as EB-GFP. The tracking model accounts for the specific movement characteristics of microtubules Moreover, scripts for secondary analysis of detected microtubule paths are provided.

plusTipTracker is part of u-track 2.0 package. The workflow is described in the reference. 

has function
Object tracking
has topic
Statistics
has biological terms
microtubules
EB1
cytoskeleton
Entry Curator
christoph_moehl
Post date
12/08/2014 - 12:53
Last modified
05/03/2023 - 10:42
Download Page
u-track 2.2
Documentation Link
https://www.utsouthwestern.edu/labs/danuser/software/#utrack_anc
Reference Publication Link
plusTipTracker: Quantitative image analysis software for the measurement of mic…