BaSiC

Type
Author
Tingying Peng
Carsten Marr
Requires
Implementation Type
Programming Language
Supported image dimension
Interaction Level
License/Openness
License
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International Public License
Description

BaSiC is a software tool for Background and Shading correction of Optical Microscopy Images. It implements an image correction method based on low-rank and sparse decomposition to solve both shading in space and background variation in time. It can correct temporal drift in time-lapse microscopy data and thus improve continuous single-cell quantification. BaSiC is available as a Fiji/ImageJ plugin.