2D

Advanced Cell Classifier is a data analyzer program to evaluate cell-based high-content screens and tissue section images developed at the Biological Research Centre, Szeged and FIMM, Helsinki (formerly at ETH Zurich). The basic aim is to provide a very accurate analysis with minimal user interaction using advanced machine learning methods.

A standalone cell tracking software for single cell migration. Tracking of cells in tissue was also done in Drosophila germband.

The ImageJFX Project aims to create a new user interface for the software ImageJ in order to ease scientific image analysis. While keeping the core components of ImageJ, ImageJFX brings scientists closer to their goal by making the interface clearer for beginners and more practical for advanced users.

QuantCenter is the framework for 3DHISTECH image analysis applications. with the goal of helping the pathologists to diagnose in an easier way. QuantCenter, is optimized for whole slide quantification. It has a linkable algorithm concept that tries to provide an easy-to-use and logical workflow. The user has different quantification modules that he or she could link one after other to fine-tune or to speed up the analysis.

COLORLAB is a component for processing, representing and reproducing color in a MATLAB environment. Among others, some of the functionalities it makes able to: -Represent the color content of any image in chromatic diagrams and tristimulus spaces in any system of primaries. -Compute advanced color descriptions of any image using several color appearance models (CIELab, CIEluv, ATD, Rlab, LLab, SVF and CIECAM). An userguide is provided.