TissUUmaps

Type
Collection
Author
Nicolas Pielawski
Axel Andersson
Christophe Avenel
Andrea Behanova
Eduard Chelebian
Anna Klemm
Fredrik Nysjö
Leslie Solorzano
Carolina Wählby
Jonas Windhager
Execution Platform
Linux
Mac
Windows
Implementation Type
library
plugin
standalone
web
Supported image dimension
2D
multi-channel
Interaction Level
Manual
Semi-automated
License/Openness
Free and open source
License
MIT
Description

TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.

has function
Visualisation
Image visualisation
has topic
Bioimage informatics
Data sharing
Digital histology
Imaging
has biological terms
Spatial omics
Spatial transcriptomics
Additional keywords
Interactive visualization
Post date
02/22/2024 - 10:34
Last modified
02/22/2024 - 11:45
Download Page
TissUUmaps webpage
Documentation Link
TissUUmaps documentation
Reference Publication Link
TissUUmaps 3 publication
Original TissUUmaps publication
Usage Example Link
TissUUmaps gallery