Nuclei Tracking (TrackMate)

Type

Workflow

Author

Paavolainen, Lassi

Requires

TrackMate

pyimagej

Execution Platform

Linux

Mac

Windows

Programming Language

Python

Supported image dimension

2D

time-series

Interaction Level

Automated

License/Openness

Free and open source

Description

Track non-dividing particles in 2D time-lapse image.

has function

Particle tracking

has topic

Machine learning

has biological terms

particles

spots

Entry Curator

lascholz

Post date

01/23/2020 - 16:01

Last modified

05/17/2023 - 20:22

Download Page

Neubias BIAFLOWS workflow of Particle Tracking with TrackMate

Reference Publication Link

TrackMate: An open and extensible platform for single-particle tracking

DOI link

BIAFLOWS-PROBLEM: NUCLEI-TRACKING-NODIVISION