VMTK: Vascular Modeling Toolkit

Type
Collection
Author
Luca Antiga
David Steinman
Requires
ITK
Execution Platform
Linux
Mac
Windows
Implementation Type
library
Programming Language
Python
Supported image dimension
3D
Interaction Level
Semi-automated
License/Openness
Free and open source
License
BSD-like license
Description

vmtk is a collection of libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis for image-based modeling of blood vessels.

vmtk is composed of

  • C++ classes (VTK and ITK -based algorithms)
  • Python classes (high-level functionality - each class is a script)
  • PypeS - Python pipeable scripts, a framework which enables vmtk scripts to interact with each other

 

has function
Image segmentation
Neuron image analysis
Visualisation
Volume rendering
has topic
Magnetic resonance imaging
Light-sheet microscopy
Additional keywords
vessel segmentation
blood vessels
aneurysm
Entry Curator
julien colombelli
Post date
01/28/2018 - 19:22
Last modified
08/07/2018 - 14:05
Download Page
http://www.vmtk.org/
Documentation Link
documented code on github
introductive presentation
tutorial
Usage Example Link
http://www.vmtk.org/documentation/screenshots.html
used to segment blood vessels network in mouse brains on lightsheet data with c…