This workflow processes images of cells with discernible nuclei and outputs a binary mask containing where nuclei are detected.
ROI measurement plug-in for Icy.
This workflow uses ICY wavelet based spot detector to detect spots in 2D images.
This component convolves the image with minimum filter. Each voxel is set to the minimum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.