Statistics

Dedicated to score tracking dataset from the ISBI tracking challenge

The plugin analyses a point pattern (positions of objects of interest) distributed within a reference structure.

This analysis allows in particular to assess deviation from spatial randomness, and to reveal trends for clustering (attraction) or regularity (repulsion). No edge correction is performed, as it is assumed that no point is expected outside the reference structure.

This plugin comes together with 3D ImageJ suites plugin.

For each ROI, computes the number of pixel over a threshold. This plugin also provides the density and outputs results as an excel file.