Rivulet 2 (Rivuletpy)

Type
Collection
Author
Liu, Siqi
Zhang, Donghao
Song, Yang
Peng, Hanchuan
Cai, Weidong
Requires
scipy
numpy
Python
Libtiff
simpleITK
cython
Execution Platform
Linux
Mac
Windows
Implementation Type
standalone
Programming Language
Python
Supported image dimension
3D
Interaction Level
Automated
License/Openness
Free and open source
License
BSD 3-Clause "New" or "Revised" License
has function
Filament tracing
Image thresholding
Neuron image analysis
Distance transform
has biological terms
neuron
olfactory projection fibres
Entry Curator
lascholz
Download Page
Rivulet project Github repository
Reference Publication Link
Automated 3D Neuron Tracing with Precise Branch Erasing and Confidence Controll…