Image annotation

Suggested def: image annotation is the process of defining metadata to a digital image, e.g. defining regions, marking points, creating textual descriptions, attaching tags to image contents. Can be manual or automatic.

Description

OMERO is a free, open source image management software. It is client-server based system which supports 5D images, including big images and high-content screening data. Data are stored on a server using relational database. They are accessed using 3 main clients, a desktop client, a web client and a command line tool. There are bindings from OMERO to other image analysis packages, like FLIMfit, OMERO.searcher. The data in OMERO are organized in groups. A user can be a member of one or more groups. This groups can be collaborative or private, there are 4 levels of permissions to access/edit/annotate/delete the data of other users.

The package is supported not only by community forums, but also by a dedicated team which helps users to solve their problems and deals with the bugs submitted via error submission system.

###Strengths

Open source, scalable software, Supports diverse sets of imaging applications and domains (EM,LM, HCS, DigPath) Cross-platform, Java-based application, API support for Java, Python, C++, Django, On-line Forums, Automatic QA and upload of software errors Multi-dimensional images, Web access, Free Demo-server accounts

Limitations

Enterprise-scale software, so complex install, requires expertise, Actively developing API, Python scripts and functions still developing

Omero
Description

This plugin provides a painter to visualize 2D flows. 2D Flows are couples of two sequences, one for the horizontal displacements, the other for the vertical displacements. This plugin provides a painter that draws flow arrows on top of another sequence.

need a thumbnail