Qualitative annotations Fiji plugins

Type
Author
Thomas Laurent orcid.org/0000-0001-7686-3249
Schaefer Franz
Gehrig Jochen orcid.org/0000-0002-1193-1324
Requires
Execution Platform
Implementation Type
Programming Language
is compatible with
Supported image dimension
Interaction Level
License/Openness
License
GPL-v3
Description

Set of Fiji plugins facilitating the systematic manual annotation of images or image-regions. From a list of user-defined keywords, these plugins generate an easy-to-use graphical interface with buttons or checkboxes for the assignment of single or multiple pre-defined categories to full images or individual regions of interest. In addition to qualitative annotations, any quantitative measurement from the standard Fiji options can also be automatically reported. Besides the interactive user interface, keyboard shortcuts are available to speed-up the annotation process for larger datasets.

The plugins can be installed by activating the Qualitative annotations plugins in Fiji.

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