GDSC plugins

Type
Author
Alex Herbert
Requires
Execution Platform
Implementation Type
Programming Language
Interaction Level
License/Openness
License
GPLv3
Description
Quote: "The GDSC ImageJ plugins are a collection of analysis programs for microscopy images including colocalisation analysis and peak finding (FindFoci)." Many types of analysis besides simply finding foci detection (spot detection) is bundled in this plugin. One prominent function is "FindFoci Optimizer". This allows feeding images with spot annotation by the user (multi-point selection tool) and scans through various parameter combinations to find the best parameter set that gives the results similar to the annotation. This is almost like machine learning... but with well-established parameter types that allows you to fully understand what is going on.
Additional keywords
Entry Curator