Elastic Alignment and Montage

Type
Collection
Author
Stephan Saalfeld
Requires
Fiji
Execution Platform
Linux
Mac
Windows
Implementation Type
plugin
Programming Language
Java
Supported image dimension
2D
Interaction Level
Semi-automated
License/Openness
Free and open source
Description

This plugin has two components:

  • Elastic Montage
    • montaging mosaics from overlapping tiles where the tiles have non-linear relative deformation
  • Elastic Stack Alignment
    • alignment of deformed section series from serially sectioned volumes
has function
Image registration
Image stitching
has topic
Bioimage informatics
has biological terms
tiles
Additional keywords
block matching
elastic deformation
mosaics
tiling
Entry Curator
migration
Post date
10/11/2013 - 15:08
Last modified
04/26/2023 - 19:15
Download Page
Bundled with Fiji
Documentation Link
http://fiji.sc/Elastic_Alignment_and_Montage
Reference Publication Link
S. Saalfeld, R. Fetter, A. Cardona and P. Tomancak (2012) "Elastic volume recon…