Collection

A collection is a software that encapsulate a set of bioimage components and/or workflows.

Description

VTK is an open-source software system for image processing, 3D graphics, volume rendering and visualization. VTK includes many advanced algorithms (e.g., surface reconstruction, implicit modeling, decimation) and rendering techniques (e.g., hardware-accelerated volume rendering, LOD control).

VTK is used by academicians for teaching and research; by government research institutions such as Los Alamos National Lab in the US or CINECA in Italy; and by many commercial firms who use VTK to build or extend products.

The origin of VTK is with the textbook "The Visualization Toolkit, an Object-Oriented Approach to 3D Graphics" originally published by Prentice Hall and now published by Kitware, Inc. (Third Edition ISBN 1-930934-07-6). VTK has grown (since its initial release in 1994) to a world-wide user base in the commercial, academic, and research communities.

Description

The BioVoxxel Toolbox is a suite which contains plugins and some macros dealing with image filtering, image segmentation and binary image processing and analysis. The following plugins are hosted here:

  • Extended Particle Analyzer
  • Binary Feature Extractor
  • Speckle Inspector
  • Watershed Irregular Features
  • EDM Binary Operations
  • Filter Check
  • Pseudo flat-field correction
  • Convoluted Background Subtraction
  • 2D Particle Distribution (Distribution_Analysis)
  • Cluster Indicator
  • SSIDC Cluster Indicator
  • Gaussian weighted Median filter
  • Adaptive Filter
  • Enhance True Color Contrast
  • Mode and Differential Limited Mean Binarization
  • Basic Recursive Filter
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Description

BIIGLE is a web-based software for image and video annotation that enables collaborative research on large datasets. It offers tools for manual and computer-assisted annotation, quality control and the collaboration on custom taxonomies to describe objects. BIIGLE is freely available and can be installed in cloud environments, a local network or on mobile platforms during research expeditions. The public instance on biigle.de is free for non-commercial use.

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Description

TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.

Description

Proxywave is software designed to assist users in creating and managing their own mobile proxies using wifi dongles. With Proxywave, users can easily create mobile proxy without any technical knowledge or experience. This platform provides a cost-effective solution for users who want to create their own mobile proxies and start their own proxy businesses. With the ability to create your own mobile proxy, Proxywave offers users a simple and easy-to-assemble solution for their proxy needs.

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