Object feature extraction

The plugin analyses a point pattern (positions of objects of interest) distributed within a reference structure.

This analysis allows in particular to assess deviation from spatial randomness, and to reveal trends for clustering (attraction) or regularity (repulsion). No edge correction is performed, as it is assumed that no point is expected outside the reference structure.

This plugin comes together with 3D ImageJ suites plugin.

This tutorial explain how to create an intensity profile over an ROI.

Allows the identification of objects by subtracting secondary objects from primary objects. For example allows to segment the cytoplasm by subtracting nuclei from cells.