Component

Three different methods for correcting fluorescence bleaching. 1. Simple (framewise ratio based) 2. Exponential (curve fitting with exponential decay model) 3. Histogram matching (register histogram shape. with 16 bit, it takes long time... it should be improved).

This plugin automatically threshold an image using the Mixture Modeling algorithm. It is an histogram-based technique that assumes that the histogram distribution is represented by two Gaussian curves.

View your multi-channel data as a montage with one image per channel plus a merged, color channel (useful to create figures for communication). 

This viewer plugin will split all N channels of the active sequence into a montage of N+1 images, with one image for each channel, plus an additionnal color (merge) rendering.

Anisotropic filter implements the classical Coherence Enhancing Diffusion Filter [Weickert]. The plugins works on the first band of a 2D, 3D and 4D sequence. 2D and 3D algorithms are proposed. For the 3D case 2 options are available: CED 1D option is the classical filter that acts mainly on the most homogeneous structure direction; CED 2D option acts on the tangential plane of the structure.