Component

A Component is an implementation of certain image processing / analysis algorithms.

Each component alone does not solve a Bioimage Analysis problem.

These problems can be addressed by combining such components into workflows.

Description

Image segmentation by representative colors selection. Two versions are available :

  • thresholding
  • positive and negative colors selection and SVM learning
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Description

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Coloc 2 is Fiji's plugin for colocalization analysis. It implements and performs the pixel intensity correlation over space methods of PearsonMandersCostesLi and more, for scatterplots, analysis, automatic thresholding and statistical significance testing.

Coloc 2 does NOT perform object based colocalization measurements, where objects are first segmented from the image, then their spatial relationships like overlap etc. are measured. This complementary approach is implemented in many ways elsewhere.

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Description

Released in 2007, there is a newer "remastered" version "DeconvolutionLab2" (2017)

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