2D tracking using KNIME and Fiji

Type
Author
Juergen Reymann
Execution Platform
Programming Language
Supported image dimension
Interaction Level
License/Openness
Description

This simple KNIME workflow solution tracks 2D objects/cells in time series. After a few intensity based preprocessing steps, objects/cells are segmented first, then it uses Fiji TrackMate LAP method for the tracking task.

Documentation starts from p23 of the linked PDF. 

Example Image: mitocheck_small.tif (2.9M)

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Last modified
05/14/2018 - 23:16