Image convolution

Image Analysis Training Resources

Submitted by Perrine on Wed, 06/30/2021 - 14:15

This is a resource for image analysis training material, with a focus on research in the life sciences.

Currently, this resource is mainly meant to serve image analysis trainers, helping them to design courses. However, we might add more text (or videos) to the material such that it could also be used by students for self-directed study.

Maximum (3D) VIB Protocol

Collection
Description

This component convolves the image with maximum filter. Each voxel is set to the maximum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.

has function
Image convolution
Morphological operation
need a thumbnail

Minimum (3D) Filter VIB Protocol

Component
Description

This component convolves the image with minimum filter. Each voxel is set to the minimum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.

has function
Image convolution
need a thumbnail

Gaussian Blur 3D (ImageJ)

Component
Description

Performs 3D Gaussian blurring.

has function
Image convolution
Smoothing
need a thumbnail
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