Java

This plugin shows the color distribution within a 3D-color-space. Extensive documentation is available atwww.f4.fhtw-berlin.de/~barthel/ImageJ/ColorInspector/help.htm.

Color Inspector 3D is also available as a stand-alone program that uses ImageJ as a library. To run it, download ColorInspector3D.jar and double click on it. On Windows, Java 5.0 or later must be installed

Choose the best auto thresholding technique for your data. 

View a single channel of a 2D image as a 3D elevation map (X,Y,Intensity).

This plugin takes a sequence of image slices stored in a folder, and delivers a list of registered image slices (with enlarged canvas). One of the images in the sequence can be selected by the user as reference and it will remain intact.

The plugin can perform 6 types of image registration techniques:

• Translation
• Rigid (translation + rotation)
• Similarity (translation + rotation + isotropic scaling)
• Affine
• Elastic (via bUnwarpJ with cubic B-splines)
• Moving least squares

All models are aided by automatically extracted SIFT features.

Source code

Installation

This plugin is bundled with the Fijij package.

Fill holes in a binary image.