| Image registration in Matlab with Image Processing Toolbox |
32 |
|
2D, 3D, multi-channel, time-series |
Matlab Image Processing Toolbox, Matlab Computer Vision System Toolbox |
Software |
… Toolbox™ and Computer Vision Toolbox™ offer four image registration solutions: interactive registration with a Registration Estimator app, intensity-based automatic image … |
| BIRL |
22 |
|
2D |
|
Software |
… BSD-3 Description BIRL stands for "Benchmark on Image Registration methods with Landmark validation". BIRL is a cross-platform framework for comparison of image registration methods with landmark validation (registration precision is measured by user landmarks). The … |
| Registrationshop |
20 |
|
2D, 3D |
elastix |
Software |
… It is an interactive front-end visualization for registration software based on Elasix (VTK/ITK) has function Image registration Affine registration Rigid registration Deformable registration … |
| ANTs: Advanced Normalization Tools |
19.993 |
|
2D, 3D, multi-channel |
ITK |
Software |
… the statistics of brain structure and function. Image Registration Diffeomorphisms: SyN , Independent Evaluation: … (2004) (2010) , Similarity Metrics , Multivariate registration , Multiple modality analysis and statistical … (link) , DiReCT in chimpanzees has function Image registration Affine registration Rigid registration … |
| simpleElastix |
19 |
|
2D |
|
Software |
… an open source, command-line program for intensity-based registration of medical images that allows the user to quickly configure, test, and compare different registration methods. SimpleElastix is an extension of … C# on Linux, Mac and Windows. The goal is to bring robust registration algorithms to a wider audience and make it … |
| TrakEM2 |
17 |
|
2D, 3D |
ImageJ, 3D Viewer |
Software |
… mining, three-dimensional modeling and image stitching, registration, editing and annotation (Fiji comes with … datasets. has function Alignment construction Image registration Affine registration Rigid registration Deformable registration … |
| elastix |
17 |
|
2D, 3D, multi-channel |
|
Software |
… Description Elastix is a toolbox for rigid and nonrigid registration of (medical) images. Elastix is based on the ITK library, and provides additional algorithms for image registration. The software can be run as a single-line … file that contains all relevant parameters for registration: transformation model, metric used to comapre … |
| performing automatic registration for CLEM |
16 |
|
2D, 3D, multi-channel |
|
Software |
… This is an example workflow of how to perform automatic registration by - first detecting spots in both images using … non clickable. has function Alignment construction Image registration Affine registration Rigid registration Spot detection has topic … |
| eC-CLEM |
14.979 |
|
2D, 3D, multi-channel, time-series |
|
Software |
… in the web. has function Alignment construction Image registration Affine registration Rigid registration Deformable registration has topic Correlative … |
| MSRC Registration Toolbox |
14.877 |
|
2D, multi-channel |
|
Software |
… Apache 2.0 Description This python toolbox performs registration between 2-D microscopy images from the same … works, please cite them if you use this toolbox: Advanced Registration and Analysis of MALDI Imaging Mass Spectrometry … , 10.1021/acs.analchem.8b02885 has function Image registration Feature-based registration has topic … |
| CMTK |
13.985 |
|
2D, 3D, multi-channel |
|
Software |
… line tools primarily provide the following functionality: registration (affine and nonrigid; single and multi-channel; … (t-tests; general linear model). has function Image registration Affine registration Deformable registration Image analysis Image … |
| SPIM Registration Method (ImageJ) |
13.834 |
|
3D |
ImageJ |
Software |
… might occur during imaging. For details about the SPIM registration, fusion & deconvolution please have a look at … with the BigDataViewer . has function Feature-based registration has topic Bioimage informatics Light-sheet … 04/27/2023 - 17:10 Download Page http://fiji.sc/SPIM_Registration_Method Documentation Link … |
| Correlia |
13 |
|
2D, multi-channel |
ImageJ |
Software |
… Correlia is an open-source ImageJ/FIJI plug-in for the registration of 2D multi-modal microscopy data-sets. The … resolutions and field-of-views. has function Image registration Affine registration Deformable registration Visualisation has topic … |
| Fiji CMTK GUI |
13 |
|
2D, 3D |
Fiji, CMTK |
Software |
… Working version of a simple GUI frontend for CMTK image registration tools in Fiji has function Image registration Affine registration Deformable registration has topic Imaging … |
| ec-clem autofinder |
13 |
|
2D, 3D, multi-channel |
|
Software |
… Free and open source Description Automatic registration in 2D or 3D based on detection or binary mask. … with detections already done on it. has function Image registration Affine registration Rigid registration has topic Correlative Light … |
| pystackreg |
11 |
|
2D, 3D |
StackReg, TurboReg |
Software |
… frame. has function Alignment construction Image registration Affine registration Rigid registration has topic Electron microscopy Fluorescence … |
| Multiview Reconstruction |
11 |
|
3D, multi-channel, time-series |
BigDataViewer, ImageJ, ImgLib2 |
Software |
… timeseries or multicolor stacks. has function Image registration Affine registration Rigid registration Affine transformation Chromatic aberration … |
| BigDataViewer |
11 |
|
2D, 3D, multi-channel, time-series |
ImgLib2 |
Software |
… Fiji's SPIMage processing pipeline. has function Image registration Affine registration Rigid registration Visualisation Image visualisation has topic … |
| BigStitcher |
11 |
|
2D, 3D, multi-channel, time-series |
ImageJ, ImgLib2, BigDataViewer |
Software |
… samples with lightsheet microscopy. has function Image registration Affine registration Rigid registration Data handling Affine transformation Image … |
| DeepCLEM |
10.7 |
|
2D |
Fiji, Register Virtual Stack Slices (Fiji), CSBDeep a toolbox for Content-aware Image Restoration (CARE) in Fiji |
Software |
… Description This Fiji plugin is a python script for CLEM registration using deep learning, but it could be applied in … also provided to train an new model, based on CSBDeep. The registration is then performed as a feature based registration, using register virtual stack plugin (which … |
| FNIRT |
10 |
|
2D |
FMRIB's Linear Image Registration Tool FLIRT |
Software |
… Group, FMRIB, Oxford, UK Requires FMRIB's Linear Image Registration Tool FLIRT Execution Platform Unsure … License/Openness I do not know Description Non linear registration intensity based for MRI brain exams. To be applied after FLIRT has function Image registration Deformable registration has topic Magnetic … |
| FMRIB's Linear Image Registration Tool FLIRT |
9 |
|
2D |
|
Software |
… I do not know Description FLIRT (FMRIB's Linear Image Registration Tool) is a fully automated robust and accurate … for linear (affine) intra- and inter-modal brain image registration. FLIRT comes with a main GUI as well as three … for concatenating saved transformations has function Image registration Linear transformation has topic Magnetic … |
| FreeD |
9 |
|
2D, 3D |
Segmentation of Clustered Cells in MATLAB |
Software |
… Bourgin, INRA Versailles, France. has function Deformable registration Feature-based registration Image segmentation Analysis Clustering has topic … … 4163 … 4190 … 4004 … 4351 … 4772 … 4761 … 4155 … Elastic registration … Shape-based registration … Object registration … |
| Automated workflow for parallel Multiview Reconstruction |
9 |
|
3D, multi-channel, time-series |
Fiji, Snakemake |
Software |
… cluster or on a single workstation. has function Image registration Image deconvolution Selective plane illumination … Workflow steps Resave to hdf5 Conversion Detection and Registration Fiji Image registration Timelapse Registration SPIM Registration Method … |
| Bigwarp |
8 |
|
2D, 3D, multi-channel |
|
Software |
… deformation from point correspondences. has function Image registration Deformable registration Warping has topic Correlative Light and Electron … Reference Publication Link Bogovic et al Robust registration of calcium images by learned contrast synthes… … … |
| SPIM Bead Registration |
8 |
|
|
ImageJ |
Software |
… Free and open source has function Feature-based registration has topic Light-sheet microscopy Entry Curator … 04/27/2023 - 16:50 Download Page http://fiji.sc/SPIM_Bead_Registration_(deprecated) … migration.tool … Stephan … Schindelin … Pavel Tomancak … 4163 … 4068 … Shape-based registration … Object registration … LSFM … Digitally scanned … |
| TeraStitcher |
7 |
|
2D, 3D, multi-channel |
|
Software |
… ) and processed. has function Alignment construction Image registration Rigid registration Image stitching Post date 01/30/2018 - 09:40 … 4192 … 4055 … 4118 … 4181 … Image alignment … Rigid image registration … basic_html … Alignment construction … Image … |
| StackReg |
7 |
|
3D, time-series |
ImageJ, TurboReg |
Software |
… of image slices. has function Alignment construction Image registration Rigid registration has topic Live sample imaging Electron … 4118 … 4043 … 4015 … 4003 … Image alignment … Rigid image registration … Optical microscopy … Optical microscope … … |
| ViBE-Z |
7 |
|
3D |
|
Software |
… the right input data and format. has function Image registration Deformable registration has topic Bioimage informatics Confocal … … 4028 … 4155 … 4054 … 4774 … Image alignment … Elastic registration … Bioimage analysis … Laser scanning microscopy … |
| BUnwarpJ |
6 |
|
2D |
ImageJ |
Software |
… License/Openness Free and open source Description 2D Image registration method based on elastic deformations represented by B-splines. has function Deformable registration Warping has topic Bioimage informatics … … Ignacio Arganda-Carreras … 4028 … 4036 … 4155 … Elastic registration … Bioimage analysis … basic_html … migration … … |
| Manual Frame Drift Registration |
6 |
|
2D, time-series |
ImageJ, Manual Tracking ImageJ |
Software |
… the landmark stays in a single place. has function Image registration Drift correction Image correction has topic … … Image preprocessing … markdown … kota … Image registration … Drift correction … Image correction … … the landmark stays in a single place. … Manual Frame Drift Registration … |
| Intramodal registration software |
6 |
|
2D |
|
Software |
… License/Openness Free and open source has function Image registration has topic Bioimage informatics Entry Curator … - 11:59 Download Page http://bigwww.epfl.ch/thevenaz/registration/ … migration.tool … Philippe Thévenaz … 4055 … … alignment … Bioimage analysis … alban.gaignard … Image registration … Bioimage informatics … Intramodal registration … |
| iterative closest point registration |
6 |
|
|
|
Software |
… functions, edge point rejection, etc. has function Rigid registration has topic Bioimage informatics Post date … Jakob Wilm … Hans Martin Kjer … 4118 … 4155 … Rigid image registration … Bioimage analysis … basic_html … Rigid registration … Bioimage informatics … The ICP algorithm takes … |
| CellProfiler Align |
5.953 |
|
2D |
CellProfiler |
Software |
… it simply shifts images in X and Y. For more complex registration tasks, you might preprocess images using a … Vision Interface , 1-7. has function Rigid registration Entry Curator migration Post date 10/15/2013 - … Processing Align … migration.tool … 4118 … Rigid image registration … markdown … migration … Rigid registration … … |
| Template Matching and Slice Alignment--- ImageJ Plugins |
5 |
|
2D, time-series |
ImageJ, OpenCV |
Software |
… stack utilized the previous matching function to do slice registration(alignment) based on a selected landmark. For … cvMatch_Template Align Slices in Stack has function Image registration Post date 05/07/2018 - 19:01 Last modified … TSENG … 4055 … Image alignment … basic_html … Image registration … This ImageJ plugin contains two functions. … |
| ClearMap |
5 |
|
3D, multi-channel |
OpenCV, scikit-image |
Software |
… 3.0 Description ClearMap is a toolbox for the analysis and registration of volumetric data from cleared tissues. It was … or samples. has function Alignment construction Image registration Image analysis Filament tracing Cell … … basic_html … Perrine … Alignment construction … Image registration … Image analysis … Filament tracing … Cell … |
| Render |
5 |
|
2D |
ImgLib2 |
Software |
… has function Alignment construction Feature-based registration Object feature extraction Data handling Image … … 4045 … 4041 … 4082 … 4197 … 4015 … 4139 … Shape-based registration … Object registration … Feature detection … Image labeling … SURF … … |
| Align slices in stack |
5 |
|
2D, time-series |
ImageJ |
Software |
… template matching function cvMatch_Template to do slice registration(alignment) based on a selected landmark. This … image stack output data: image stack has function Image registration Additional keywords drift correction Post date … … kota … 4515 … 4055 … Image alignment … markdown … Image registration … Align_slices in stack utilized the template … |
| UnwarpJ |
5 |
|
|
ImageJ |
Software |
… Free and open source has function Deformable registration has topic Bioimage informatics Entry Curator … Reference Publication Link Elastic Registration of Biological Images Using Vector-Spline … Philippe Thévenaz … Michael Unser … 4028 … 4155 … Elastic registration … Bioimage analysis … migration … Deformable … |
| Register Virtual Stack Slices (ImageJ) |
5 |
|
2D, 3D |
ImageJ |
Software |
… remain intact. The plugin can perform 6 types of image registration techniques: - Translation - Rigid (translation + … automatically extracted SIFT features. has function Image registration has topic Bioimage informatics Additional … … Bioimage analysis … basic_html … marielaureb … Image registration … Bioimage informatics … A Jython script using … |
| OpenCV feature2d module |
5 |
|
2D |
OpenCV |
Software |
… and open source License BSD has function Feature-based registration Image analysis Image feature detection Object … … 4163 … 4111 … 4065 … 4074 … 4023 … 4155 … Shape-based registration … Object registration … General image analysis … Image feature … |
| Correct 3D drift |
5 |
|
2D, 3D, time-series |
|
Software |
… Free and open source License GPLv3 Description Rigid registration of time series in 3D. A video tutorial is … ) has function Image registration has topic Live sample imaging Fluorescence … … Image alignment … basic_html … christoph_moehl … Image registration … Live sample imaging … Fluorescence microscopy … |
| Register Virtual Stack Slices (Fiji) |
5 |
|
3D, time-series |
Fiji |
Software |
… remain intact. The plugin can perform 6 types of image registration techniques: Translation Rigid (translation + … is bundled with the Fijij package. has function Image registration has topic Bioimage informatics Additional … … Bioimage analysis … markdown … migration … Image registration … Bioimage informatics … This plugin takes a … |
| 3D segmentation (reconstruction) and modeling using Free-D |
4.993 |
|
2D, 3D |
|
Software |
… 3d stacks * (optional for serial sections) perform a 2D registration to align image slices * segment/reconstruct 3D … contours is on the software's TODO list has function Image registration Analysis Image segmentation Additional keywords … … 4004 … Image alignment … basic_html … czhang … Image registration … Analysis … Image segmentation … Free-D ( … |
| 2D brain slice region annotation: SliceMap |
4.985 |
|
2D |
|
Software |
… the reference slices to the sample slice (using elastic registration plugin BUnwarpJ) and uses the resulting image … has function Image registration Image segmentation has topic Widefield … … Epifluorescence microscopy … basic_html … czhang … Image registration … Image segmentation … Widefield microscopy … … |
| Vaa3D |
4.88 |
|
2D, 3D, multi-channel, time-series |
Vaa3D, ITK, ICY Annotation, 3D Viewer |
Software |
… image analysis (cell segmentation, neuron tracing, brain registration, annotation, quantitative measurement and … platform, possibly within minutes! has function Image registration Cell segmentation Annotation Data handling … … Plotting … Bioimage analysis … basic_html … kota … Image registration … Cell segmentation … Annotation … Data handling … |
| Transform Virtual Stack Slices |
4 |
|
3D |
ImageJ |
Software |
… License/Openness Free and open source has function Rigid registration Geometrical transformation has topic Bioimage … … Stephan Saalfeld … 4118 … 4161 … 4155 … Rigid image registration … Bioimage analysis … migration … Rigid registration … Geometrical transformation … Bioimage … |
| The Visualisation Tooklit (VTK) |
4 |
|
2D, 3D, time-series |
|
Software |
… academic, and research communities. has function Rigid registration Image thresholding Visualisation Image … … 4045 … 4041 … 4758 … 4759 … 4198 … 4172 … Rigid image registration … Thresholding … Clustering-based image … … Slice viewing … basic_html … jackyko1991 … Rigid registration … Image thresholding … Visualisation … Image … |
| StabiTissue |
4 |
|
3D |
Python |
Software |
… stabilized images in a new folder 2701 has function Rigid registration has topic Bioimage informatics Entry Curator … Olivieri, Carlos Tadokoro … 4118 … 4155 … Rigid image registration … Bioimage analysis … basic_html … volker … Rigid registration … Bioimage informatics … - 2D Stabilization in … |
| Resolving the process of Clathrin mediated endocytosis using Correlative Light & Electron Microscopy (CLEM) |
4 |
|
|
|
Software |
… License/Openness Commercial Description Multimodal image registration based on manual selection of matching pairs of landmarks. This image registration workflow is based on MATLAB’s image processing … … basic_html … natasa … Multimodal image registration based on manual selection of matching pairs … |
| ImageJ Align RGB planes |
3.973 |
|
2D |
ImageJ, EBImage rotate, CellProfiler Align |
Software |
… window, but use those buttons instead." has function Rigid registration Rotation Chromatic aberration correction … 4475 … Gabriel Landini … 4118 … 4017 … 4157 … Rigid image registration … Channel shift correction … basic_html … migration … Rigid registration … Rotation … Chromatic aberration correction … … |
| u-track |
3.854 |
|
2D, 3D, time-series |
Matlab Image Processing Toolbox, Bio-Formats |
Software |
… fluorescently-labeled cell nuclei. has function Affine registration Cell tracking Particle tracking Visualisation … … 4057 … 4207 … 4141 … 4045 … 4114 … 4778 … Affine image registration … Plotting … Slide scanner … FLIM … basic_html … Perrine … Affine registration … Cell tracking … Particle tracking … … |
| ITK |
3 |
|
2D, 3D, multi-channel, time-series |
|
Software |
… end users without development skills has function Image registration Image analysis Image segmentation Image … image thresholding … basic_html … dscho … Image registration … Image analysis … Image segmentation … Image … |
| TurboReg |
3 |
|
|
ImageJ |
Software |
… and the other the target image. has function Image registration has topic Imaging Entry Curator lplantard Post … … 4066 … Image alignment … basic_html … lplantard … Image registration … Imaging … The purpose of this plugin is to … |
| Amira |
3 |
|
2D, 3D, multi-channel, time-series |
|
Software |
… to neuroscience and bioengineering. " has function Image registration Analysis Visualisation has topic Multimodal … … Image alignment … Plotting … basic_html … kota … Image registration … Analysis … Visualisation … Multimodal imaging … |
| Landmark Correspondences |
3 |
|
2D |
ImageJ, Fiji |
Software |
… Squares fit for the available models. has function Image registration Geometrical transformation has topic Imaging … … 4774 … Image alignment … basic_html … migration … Image registration … Geometrical transformation … Imaging … … |
| Morpholeaf |
3 |
|
|
FreeD |
Software |
… and Development group at RDP, Lyon. has function Image registration Image feature detection has topic Bioimage … … Bioimage analysis … basic_html … Perrine … Image registration … Image feature detection … Bioimage informatics … |
| MultiStackReg |
3 |
|
3D |
Fiji, TurboReg |
Software |
… two stacks. has function Alignment construction Image registration has topic Imaging Electron microscopy Light … … basic_html … volker … Alignment construction … Image registration … Imaging … Electron microscopy … Light … |
| KNIME align image |
3 |
|
2D |
KNIME |
Software |
… in KNIME Image Processing extension has function Image registration has topic Bioimage informatics Additional … Bioimage analysis … basic_html … julien colombelli … Image registration … Bioimage informatics … The input image is … |
| Elastic Alignment and Montage |
3 |
|
2D |
Fiji |
Software |
… series from serially sectioned volumes has function Image registration Image stitching has topic Bioimage informatics … … Bioimage analysis … markdown … migration … Image registration … Image stitching … Bioimage informatics … This … |
| Align Image by line ROI |
3 |
|
2D |
Fiji |
Software |
… line ROIs and align two images. has function Image registration has topic Bioimage informatics Entry Curator … … Bioimage analysis … basic_html … migration … Image registration … Bioimage informatics … Manually selecting line … |
| pyBPDL |
3 |
|
2D |
Python |
Software |
… activations in a time domain, etc. has function Image registration Image analysis Shape features has biological … … General image analysis … Area … basic_html … Image registration … Image analysis … Shape features … The Binary … |
| NanoJ |
3 |
|
2D, 3D |
ImageJ |
Software |
… Tools for super resolution microscopy has function Image registration Image analysis Image processing Image correction … localization microscopy … basic_html … czhang … Image registration … Image analysis … Image processing … Image … |
| Image Stabilizer |
3 |
|
2D, time-series |
ImageJ |
Software |
… and color images. See also this tweet has function Image registration Additional keywords Optical Flow Lucas-Kanade … Li … 4055 … Image alignment … markdown … migration … Image registration … This plugin stabilizes jittery image stacks … |
| Spark Stitcher |
3 |
|
3D, multi-channel |
Fiji |
Software |
… Fiji https://github.com/fiji/Stitching has function Image registration Illumination correction Image stitching has … diSPIM … COLM … SPED … mSPIM … iSPIM … basic_html … Image registration … Illumination correction … Image stitching … … |
| MeVisLab |
3 |
|
2D, 3D, multi-channel, time-series |
|
Software |
… open source Free but not open source has function Image registration Image segmentation Morphological operation … … Mathematical morphology … Plotting … MRI … CT … Image registration … Image segmentation … Morphological operation … … |
| Epina Image Lab |
3 |
|
2D |
|
Software |
… color photos. has function Alignment construction Image registration Image analysis Image processing has topic … … basic_html … czhang … Alignment construction … Image registration … Image analysis … Image processing … Multimodal … |
| simpleITK |
3 |
|
2D, 3D |
|
Software |
… towards supporting R packaging. has function Image registration Image analysis Image segmentation Data handling … table … Bioimage analysis … basic_html … czhang … Image registration … Image analysis … Image segmentation … Data … |
| QuantiFish |
3 |
|
2D |
|
Software |
… fluorescence throughout the specimen. has function Image registration Image thresholding Object counting Object … Optical microscope … Light microscope … basic_html … Image registration … Image thresholding … Object counting … Object … |
| Cancer Imaging Phenomics Toolkit (CaPTk) |
3 |
|
2D, 3D |
|
Software |
… mechanisms of cancer development. has function Image registration Image analysis Image segmentation Object feature … table … Bioimage analysis … basic_html … czhang … Image registration … Image analysis … Image segmentation … Object … |
| Fast4DReg |
3 |
|
2D, 3D, multi-channel, time-series |
|
Software |
… suffer from a misalignment of channels. has function Image registration has topic Live sample imaging Fluorescence … … Image alignment … basic_html … jwpylvanainen … Image registration … Live sample imaging … Fluorescence microscopy … |
| MIPAV |
3 |
|
2D, 3D, multi-channel, time-series |
|
Software |
… monitor, and treat medical disorders. has function Image registration Image analysis Object-based colocalisation Image … … Bioimage analysis … MRI … CT … basic_html … Image registration … Image analysis … Object-based colocalisation … … |
| Relate |
2.989 |
|
2D, 3D, multi-channel |
|
Software |
… analytical data to text or CSV files has function Image registration Image analysis Image segmentation Particle … … Light microscope … basic_html … pmachado … Image registration … Image analysis … Image segmentation … Particle … |
| Imaris |
2.938 |
|
|
Imaris |
Software |
… data visualization (hundreds of GB) has function Image registration Object detection Object tracking Visualisation … … Tracking … Plotting … basic_html … dscho … Image registration … Object detection … Object tracking … … |
| MIA |
2.87 |
|
2D, 3D, multi-channel, time-series |
Fiji, MorphoLibJ |
Software |
… Facility at the University of Bristol. has function Image registration Image analysis Image segmentation Object … … Lookup table … HCS … basic_html … czhang … Image registration … Image analysis … Image segmentation … Object … |
| Measure cell volume over time |
2.839 |
|
3D, time-series |
ImageJ, Imaris |
Software |
… 3. Correction of shift between the time frames by rigid registration [imagJ macro] 4. Bleaching correction [imageJ … Documentation Link This Page DOI link registration_and_bleaching_correction: initial resease … … 3. Correction of shift between the time frames by rigid registration [imagJ macro] 4. Bleaching correction [imageJ … |
| 3D estimation of synaptic vesicle distribution in serial section TEM (ssTEM) |
2 |
|
|
|
Software |
… 1. Bias correction for inhomogene lighting 2. Image registration of TEM sections / stacks 3. Detection of … 1. Bias correction for inhomogene lighting 2. Image registration of TEM sections / stacks 3. Detection of … |
| Analyze 12.0 |
2 |
|
|
|
Software |
… users with all the key display, editing, processing, registration, and measurement tools needed to realize their … users with all the key display, editing, processing, registration, and measurement tools needed to realize their … |
| MetroloJ |
2 |
|
2D, 3D, multi-channel |
ImageJ |
Software |
… and finally the characterization of its spectral registration. has function Image validation has topic … and finally the characterization of its spectral registration. … MetroloJ … |
| Lama: The LocAlization Microscopy Analyzer |
2 |
|
2D, multi-channel |
|
Software |
… analysis, localization precision estimation and image registration. LAMA works with a graphical user interface … analysis, localization precision estimation and image registration. LAMA works with a graphical user interface … |
| Schnitzcells |
1 |
|
2D, time-series |
MATLAB |
Software |
… License/Openness Free and open source License GPL (registration required) Description Schnitzcells is a MATLAB … |
| FARSIGHT |
1 |
|
|
Segmentation of Clustered Cells in MATLAB |
Software |
… cell tracing, cell tracking, and vessel tracing. Registration and mosaicing algorithms for large scale … cell tracing, cell tracking, and vessel tracing. Registration and mosaicing algorithms for large scale … |
| Snakemake |
1 |
|
|
|
Software |
|
| OpenCL |
0.989 |
|
2D, 3D, multi-channel, time-series |
|
Software |
|
