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This plugin calculates a classification based on the histogram of the image by generalizing the IsoData algorithm to more than two classes.

This plugin works on 8-bit and 16-bit grayscale images only.

This tool compute measures on the ROIs of the chosen sequence, updates the measures live when ROIs are changed and allows to copy/paste the measures to 3rd-party sheet edition softwares. Measures include geometric (bounding box) and intensity information.

It can complement the default ICY built inROI table, where measurements such as volume meausirements, intensity measurements, ... are built in and can be exported as excel as well.

PSF Generator is a software package that allows one to generate and visualize various 3D models of a microscope PSF. The current version has more than fifteen different models.

3D diffractive models: scalar-based diffraction model Born & Wolf, scalar-based diffraction model with 3 layers Gibson & Lanni, and vectorial-based model Richards & Wolf, and Variable Refractive Index Gibson & Lanni model.

Bundled with MBF pacakge.

An example of a very simple overlay.

Extract image features based on one or more intensity thresholds, and output the result as a labeled image or as a region of interest.

Tutorial explaining how to display a JFreeChart graph in Icy.

The Fiji Packager allows you to bundle an existing Fiji installation so you can share all the plugins and update sites with colleagues. It makes a single archive (.zip, .tar.gz, .tar.bz2 are supported at the moment) from the files in Fiji.app/.

This module lets you outline the objects in an image using the mouse.

Details how to listen and use events provided by the main interface.