The Allen Cell Structure Segmenter
Type
License/Openness
Description
The Allen Cell Structure Segmenter is a Python-based open source toolkit developed at the Allen Institute for Cell Science for 3D segmentation of intracellular structures in fluorescence microscope images.
It consists of two complementary elements: (1) image segmentation workflows for 20 distinct intracellular structure localization patterns. (2) Human-in-the-loop iterative deep learning segmentation workflow trained on ground truth manually curated data from the images segmented with the segmentation workflow.
Post date
01/02/2019 - 10:09
Last modified
01/02/2019 - 10:43