Contents

Image Title Category Type Description Updated
need a thumbnail Jython execnet for Icy Software Component

Enables Python scripts that are run inside Icy to communicate with other Python instances outside Icy. This allows the access to CPython-only libraries such as Numpy.

Resources requiring this include: CalloseCounter, BioFlow, EvaFE In Python

03/01/2020 - 16:06
need a thumbnail ROI image process tutorial 2 Software Component

This tutorial explain how to create an intensity profile over an ROI.

04/29/2023 - 17:44
need a thumbnail Interactive Image Viewer (EBImage) Software Component

display-shiny

03/02/2020 - 22:22
need a thumbnail Stack Rotation by Angle Software Component 10/17/2019 - 11:42
need a thumbnail Microscope Snapper (Icy) (deprecated) Software Component 04/29/2023 - 17:07
need a thumbnail EBImage Median Filter Software Component

Process an image using Perreault’s modern constant-time median filtering algorithm.

10/16/2019 - 16:55
IdentifyDeadWorms Software Component

Identifies dead worms based on a couple of parameters. 

03/02/2020 - 16:04
need a thumbnail Screen shot (Icy) Software Component 03/02/2020 - 12:09
need a thumbnail ROI image process tutorial 1 Software Component

This tutorial details how to process an image area defined by ROI.

05/17/2023 - 10:19
need a thumbnail Merger Software Component

Merges images from different columns to one image object as follows: the input images are regarded as one single line of pixels (depending on the iteration order of each underlying image factory). 

10/16/2019 - 14:41
need a thumbnail Microscope Advanced Acquisition (deprecated) Software Component 04/29/2023 - 16:42
need a thumbnail DisplayDensityPlot Software Component

DisplayDensityPlot plots measurements as a two-dimensional density plot.

10/16/2019 - 13:40
H2 database Icy plugin Software Component

H2 database packaged as an Icy plugin

See http://www.h2database.com

10/17/2019 - 13:36
need a thumbnail RelateObjects Software Component 10/29/2019 - 18:04
need a thumbnail Animated overlay tutorial Software Component 09/13/2017 - 12:05
need a thumbnail Voronoi Segmentation (KNIME) Software Component 10/18/2019 - 15:03
need a thumbnail ImarisMeasurementPro Software Component 09/13/2017 - 12:06
need a thumbnail Save as animated gif (ImageJ) Software Component 03/02/2020 - 12:00
need a thumbnail ExpandOrShrinkObjects Software Component

ExpandOrShrinkObjects expands or shrinks objects by a defined distance.

10/16/2019 - 16:46
need a thumbnail RunImageJ Software Component

Via the RunImageJ module, CellProfiler can load images, run an ImageJ macro or plugin on them, and retrieve the results for downstream analysis via the RunImageJ module.

10/16/2019 - 13:13