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Name Category Image requires Type interaction level License/Openness has function has topic
plusTipTracker Software Matlab Image Processing Toolbox, MATLAB, MATLAB Optimization toolbox, MATLAB Statistics toolbox, MATLAB Curve Fitting Toolbox Workflow Automated Free and open source Object tracking Statistics
Microtubule end tracking in Drosophila Oocyte Software Fiji, TrackMate, Bleach Correction, Fourier Bandpass Filter, Temporal Medial Filter Workflow Manual Free and open source Object tracking
Tracking of focal adhesions in 2D time lapse movies Software MATLAB Workflow Semi-automated I do not know Image segmentation, Object tracking Fluorescence microscopy
Automatic 2D/3D Tracking using ilastik Software need a thumbnail ilastik Workflow Semi-automated Free and open source Image segmentation, Object tracking Bioimage informatics, Machine learning
Manual Tracking Components of ImageJ Software Fiji Workflow Manual Free and open source Object tracking
2D tracking using KNIME and Fiji Software KNIME Image Processing and Analysis, Fiji Workflow Semi-automated Free and open source Object tracking
Focal Adhesion Analysis Server Software Workflow Automated Free but not open source Object tracking
2D and 3D tracking based on global cost function optimization Software ImageJ, MTrackJ, ImageScience.jar, Jama, Tracking2.0 Workflow Automated Free and open source Object tracking, Particle tracking, Trajectory analysis Bioimage informatics, Machine learning
FlyLimbTracker Software Drosophila track legs Component, Workflow Semi-automated Free but not open source Active contours, Interactive segmentation, Object tracking, Isolated object tracking Microscopy, Fluorescence microscopy
HyphaTracker Software hyphatracker ImageJ Component, Workflow Automated, Semi-automated Free and open source Image analysis, Filament tracing, Image segmentation, Object tracking, Drift correction, Image processing Light microscopy, Bright field microscopy
Aivia - Aivia Cloud - Aivia Web Software Collection, Workflow Automated, Manual, Semi-automated Commercial Analysis, Frequency analysis, Image analysis, Colocalisation analysis, Object-based colocalisation, Pixel-based colocalisation, Filament tracing, Image feature detection, Image segmentation, Cell segmentation, Pixel classification, Neuron image analysis, Object classification, Object counting, Texture extraction, Object tracking, Cell tracking, Particle tracking, Annotation, Classification, Editing, Image deconvolution, Visualisation, Image visualisation, Volume rendering, Plotting Machine learning
Nuclei Tracking (ImageJ) Software need a thumbnail ImageJ Workflow Automated Free and open source Object tracking
Object Tracking (ImageJ) Software need a thumbnail ImageJ Workflow Automated Free and open source Object tracking Live sample imaging
Object Tracking (Octave) Software need a thumbnail GNU Octave Workflow Automated Free and open source Object tracking Bioimage informatics, Live sample imaging
Object Tracking (MU-Lux-CZ) Software need a thumbnail OpenCV, scikit-image, Tensorflow, Keras Workflow Automated Free and open source Object tracking Machine learning