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Name Category Image requires Type interaction level License/Openness has function has topic
​The Allen Cell Structure Segmenter Software The Allen Cell Structure Segmenter Overview Python 3.6 Collection Automated, Semi-automated Free and open source Image segmentation, Interactive segmentation Bioimage informatics
μforum Forum topic
ZeroCostDL4Mic Software need a thumbnail Collection Semi-automated Free and open source Image segmentation, Object detection, Image denoising, Image correction Electron microscopy, Super-resolution microscopy, Bright field microscopy, Machine learning
ZEN Blue Software need a thumbnail
ZEN and APEER Machine Learning Platform Software arivis Vision4D, ZEN Blue, APEER Collection, Component, Workflow Automated, Manual, Semi-automated Commercial, Free and open source Image segmentation, Cell segmentation, Model-based segmentation, Pixel classification, Object classification, Image annotation Digital histology, High content screening, Electron microscopy, Light microscopy, Fluorescence microscopy, Machine learning, Supervised learning
Zebrafish larvae - Widefiled/Brightfield Dataset
Zebrafish Embryo Tool Software ImageJ Workflow Semi-automated Free and open source Alignment construction Fluorescence microscopy
Z-spacing correction for Fiji Software Fiji Component Automated Free and open source Warping, Image correction Electron microscopy
YeastSpotter Software Python Component Automated Free and open source Cell segmentation Bioimage informatics
Yapic Software need a thumbnail Component Automated Pixel classification Machine learning, Supervised learning
XuvTools Software need a thumbnail Collection Automated, Manual, Semi-automated Free and open source Image reconstruction, Image stitching Bioimage informatics, Confocal microscopy
WSPM Software need a thumbnail MATLAB Collection I do not know I do not know
Wound Healing Tool Software Measure area of the wound ImageJ Workflow Automated Free and open source
Wound healing assay: analysis in ImageJ Software ImageJ Workflow Automated Free and open source Image segmentation, Wound-healing analysis
Wound healing assay: analysis in CellProfiler Software CellProfiler Workflow Automated Free and open source Image segmentation, Wound-healing analysis
WormScan Software Fiji Collection Free and open source
WormGUIDES Atlas Software WormGuides screenshot Collection Manual, Semi-automated I do not know Analysis, Object feature extraction, Annotation, Visualisation Bioimage informatics
Worm Toolbox: High.throughput screening of C. elegans Software CellProfiler Collection Semi-automated Free and open source
Working with stacks: 3D image visualisation Training Material
Working with pixels: filters, morphomaths and binary operations Training Material