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Maximum Entropy Threshold 3 need a thumbnail ImageJ, Aphelion
Moment thresholding 3 need a thumbnail ImageJ, Aphelion
Counting foci in ImageJ 2.965 2D ImageJ
Local Thresholding 2 need a thumbnail
Auto Local Threshold 2 need a thumbnail Local Thresholding
Fast Multilevel Thresholded-Landweber Deconvolution Algorithm 2 need a thumbnail MATLAB, ImageJ
Best Threshold 2 need a thumbnail
Multi Otsu Threshold 2 need a thumbnail ImageJ, Histogram, Multilevel Thresholding
RATS: Robust Automatic Threshold Selection 2 need a thumbnail ImageJ, Local Thresholding, Adaptive Thresholding (EBImage)
Quantification of outer ring diameters of centriole or PCM proteins of cycling HeLa cells in interphase 2 Combined view from Figure 1 Lawo et al. 2D, 3D, multi-channel ImageJ, R Project for Statistical Computing, Maximum Entropy Threshold, Analyze Particles, OMERO.insight-ij client
CellProfiler Threshold 2 need a thumbnail CellProfiler
Global Thresholder 2 need a thumbnail
Thresholder 2 need a thumbnail
Mixture Modeling Thresholding 2 need a thumbnail ImageJ, Histogram
Otsu Thresholding 2 need a thumbnail ImageJ, Histogram
MultiThresholder 2 need a thumbnail ImageJ, Auto Threshold
Thresholder (ImageJ) 2 need a thumbnail 2D, 3D, time-series ImageJ
Thresholded pixel density 2 need a thumbnail
Color Picker Threshold 2 need a thumbnail
Multilevel Thresholding 2 need a thumbnail
Adaptive Thresholding (EBImage) 2 2D
Auto Threshold 2 2D Fiji
Fourier Ring Correlation 2 need a thumbnail Fourier Ring Correlation
Mahotas / Thresholding 2 need a thumbnail Local Thresholding
VolViewer 1 VolViewer screenshot 3D Viewer
1
ImmunoRatio 1 2D ImageJ, Colour Deconvolution
ImageJ Bandpass filter 1 ImageJ bandpass screenshot ImageJ
ICY batch pixel density measurement 1 2D
Interactive watershed 1 2D, 3D Fiji
1
Definiens Developer 1 need a thumbnail
JACoP 1 example of partial colocalisation from reference publication 2D, 3D, multi-channel, time-series ImageJ
Matlab Computer Vision System Toolbox 1 need a thumbnail MATLAB, Optical Flow, Object Tracking and Metadata Management
Find, Draw and Measure Wells in a Multi-Well Plate Picture 1 2D ImageJ
QuimP 1 Screenshot 2D, multi-channel, time-series Java 8
1
HK-Means 1 need a thumbnail HK-Means
spot detection and codistribution analysis 1 endosomes and spot neighbors 2D, multi-channel ImageJ, MATLAB
Matlab Image Processing Toolbox 1 need a thumbnail MATLAB
Dithering 1 2D ImageJ
CEM 1 Myelin 2D, 3D, multi-channel ImageJ
DNA MicroArray Image Processing Case Study 1 2D MATLAB, Matlab Image Processing Toolbox, MATLAB Signal Processing Toolbox
1
3D Objects Counter 1 need a thumbnail 3D Fiji, ImageJ
Wound healing assay: analysis in ImageJ 1 2D, time-series ImageJ
Object Classification using ilastik 1 2D, 3D, multi-channel, time-series VIGRA, ilastik
NeuriteTracer 1 2D ImageJ
1
MATLAB Image Segmentation Tutorial 1 2D MATLAB, Matlab Image Processing Toolbox
1
Image denoising 1 need a thumbnail MATLAB
Simple Tracing DF-Tracing 1 Simple Tracing - DT-fields 3D Vaa3D
Columbus Image Data Storage and Analysis System 1 Columbus screenshot
FISHfinder 1 3D, multi-channel MATLAB
clij - GPU-acceleration for ImageJ 1 2D, 3D Fiji
1
Coloc 2 1 2D Fiji
Microtubule Length Analysis 1 need a thumbnail 2D, 3D Fiji, Tubeness
3D object based colocalization using KNIME 1 3D KNIME Image Processing and Analysis
Quantifying staining in tissue sections 0.977 2D ImageJ, Colour Deconvolution
VIGRA 0.762 2D, 3D, multi-channel, time-series